Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913103.1_cds_XP_016463175.1_56320
CDS Infomation

[gene=LOC107786240] [db_xref=GeneID:107786240] [protein=ankyrin repeat-containing protein At5g02620-like] [protein_id=XP_016463175.1] [location=complement(join(3738..4155,4191..4642,5289..5698,6167..6500))] [gbkey=CDS]
Sequence

ATGGAAGCCCCAACAGCTCAGCCGACCACACCCCGGAAAAAGATGACGAAACAATTAACC
GGAAAACGTGATGATTCTGCCTTGCATTCGGCAGCTAGAGCTGGAAATATTGTTGCAATA
AGAGAGACTATAAAGAACACGGGCGAGGAAGAATTAGCAGAGTTGTTGATAAAGCAAAAT
TCAGCAGGAGAGACCCCCTTGTATGTTGCAGCTGAATATGGTTATTATGAGGTGGTTAGG
GAGATGATCATGTATTATGATCTTGTCGCAGCTGGAATCAAAGCGAGGAACGGGTTTGAT
GCATTGCATATTGCTGCCAAACAAGGAGATTTGGATATGGTGAAGGTATTAATGGAAGCA
CATCCAGAGCTAGCGATGACAGTTGATGTTGCAAATACAACAGCTTTGCATACTGCAGCG
AACCAAGGGCATATAGAGGTGGTGAATTATTTCTTGGAGGAACAGAGTAGTTTGGCCACT
ATAGCTAAAAGTAACGGGAAAACAGCGCTGCATTCTTCTGCAAGGAATGGACATTTGCAG
GTTTTGAAGGCTCTTTTGAGCAAGGAGCCAGGTATTGCGACACGGATGGATAATAAAGGA
CAGACTGCACTTCACATGGCTGTCAAAGGACAAAATCTTGAGGTTGTGGAGGAGCTGATC
AAAACTGATCCTTCATTAATTAACATGGTTGACAATAAGGGTAATACGCCATTGCATATT
GCAGCTCGGAAAGGGAGGTCTGAGATTGTTAAATTGCTACTTGGGCAGAATGAAACAGAC
AAAAAATTGATCAATAGGTCCCACGAGACAGCTCTCGACACTGCTGAGAAAATGTCACAG
GCTGAAACTGTAGCCATCCTACAGGAACATGGCGTTGAAAGTGCGCGAGTTCTCAAACCA
CACGCAACAAATCCAGCAAGAGAGTTGAAGCAAACCGTTAGTGACATTAAGCACGAGGTG
CACGATCAGTTAAAACACACGCGACAGACAAGAAAACGCATACAAGGCATCGCCAAACGC
CTCCACAAAATGCATCGAGAAGGCCTAAACAACGCGATCAACTCAACAACTGTCGTTGCT
GTACTTATCGCTACGGTTGCCTTTGCAGGAATATTTCAAGTGCCGGGGCAATACTATATG
GATCCACATAACCTTCCACCTGGCCATATAATTGGAGAAGCAAACATATCAAACCACCCT
GTATTTCTCGTTTTCTTTATCTTCGACTCTATCGCGTTATTCATCTCGCTTGCAGTTGTG
GTTGTTCAGACAACAGTTGTGGTCATTGAAAGCAAAGCAAAGAAGAAGTTGATGTCAATT
ATAAACAAGCTAATGTGGGTGGCTTGTGTGCTTGTTTCAGTGGCATATTTGGCACTGTCA
TTTGTTGTTGTTGGCACACGTTATAGGCTGATGGCAATTATTGTGTCAATTCTTGGAGCA
GTTATAATGATTTCAACAATTGGAGTAATGTTATTTTGGGTTATAAGCCATAGGATTGAG
TCATCAAACAAGAAGAGCATGAGAAAGAACTCTATGGCTAGCAAGTCATTGGAATTGTCA
GATTCAGTCCTCTCTGATGACAATGATGAATACAAGAAAATATATGCTATATAA

Peptide Sequence

PEP ID

XP_016463175.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana tabacum]
Sequence

MEAPTAQPTTPRKKMTKQLTGKRDDSALHSAARAGNIVAIRETIKNTGEEELAELLIKQN
SAGETPLYVAAEYGYYEVVREMIMYYDLVAAGIKARNGFDALHIAAKQGDLDMVKVLMEA
HPELAMTVDVANTTALHTAANQGHIEVVNYFLEEQSSLATIAKSNGKTALHSSARNGHLQ
VLKALLSKEPGIATRMDNKGQTALHMAVKGQNLEVVEELIKTDPSLINMVDNKGNTPLHI
AARKGRSEIVKLLLGQNETDKKLINRSHETALDTAEKMSQAETVAILQEHGVESARVLKP
HATNPARELKQTVSDIKHEVHDQLKHTRQTRKRIQGIAKRLHKMHREGLNNAINSTTVVA
VLIATVAFAGIFQVPGQYYMDPHNLPPGHIIGEANISNHPVFLVFFIFDSIALFISLAVV
VVQTTVVVIESKAKKKLMSIINKLMWVACVLVSVAYLALSFVVVGTRYRLMAIIVSILGA
VIMISTIGVMLFWVISHRIESSNKKSMRKNSMASKSLELSDSVLSDDNDEYKKIYAI

Transcript Sequence

Gene sequence data has not been registered.